top of page

GENE PANELS

EXOME - CARDIOMYOPATHIES (CM)

Engineering Plans

Learn more

Version :

11

Status :
Inactive.png
Size :

208 genes

Start date :

Website :

Extra info :

CMGP

Learn more

Sample types

We aim to keep the list with sample types updated. However, if you believe we offer this gene panel on other sample types, or if you have a very specific sample type you'd like to evaluate : please contact the corresponding persons for either diagnostic or research purposes.

* Microtube can be  a either a cryovial or eppendorf tube (0,5 ; 1,5 or 2 ml). Please consider the quality of the tube used (nuclease free ; free of RNA/DNA ; sterile ; LoBind) according to application needed.  

Blood > DNA

DBS / Guthrie card / Punch in microtube*

Min. 1 punch

Room temperature

Blood > DNA

EDTA tube

10 ml (min. 3 ml)

Room temperature

Cells of various tissue origins > DNA

Microtube* with cell pellet or on lysis buffer

> 5 million cells

Dry ice

DNA from various tissues > DNA

Microtube* or 96 well plate

See test details/specifications

Room temperature

Tissue of various origins > DNA

Cryovial containing stabilizer (eg. AllProtect) or tissue homogenized on lysis buffer

Application/tissue specific (contact us)

Dry ice

Extra requirements

Absorbance ratio A260/A230 - Minimum
DNA from various tissues

Minimum: 1,5

Lower values are indicative for indicative for EDTA, carbohydrate, chaotropic salts (and also protein) contamination

Absorbance ratio A260/A280 - Minimum
DNA from various tissues

Minimum: 1,5

Lower values are indicative for indicative for protein, phenol or other aromatic compound contamination

Elution buffer : nuclease free water, Tris-HCl or TE
DNA from various tissues

:

Please use nuclease free elution buffers, however this assay is compatible with either water, Tris-HCl as TE.

Minimum DNA concentration
DNA from various tissues

Minimum: 7,7 ng/µl

A minimum concentration of 7,7 ng/µl is required, however succesfull experiments are possible below this limit.

Minimum DNA quantity
DNA from various tissues

Minimum: 200 ng

We prefer delivery of at least 1 µg of DNA

Image by Mezidi Zineb
Sample types
Cardboard Box

Deliverables

Below, you can find the type of data files that can be retrieved for this test.

If you require more information or need a more custom output, please consult our Bioinformatics page.

Called variants - vcf file

Text file containing all detected variants as compared to the relevant reference genome

Diagnostic / RUO
Clinical report

Diagnostic report generated by Clinical Geneticist/ Pathologist / Hematologist

Diagnostic
Raw data - bam file

Binary data file containing the aligned reads

RUO (on request)
Raw data - fastq file

Data file containing the raw (unaligned) reads

RUO (on request)
Run folder

The complete run folder can be transferred if it concerns a run reservation (private run)

RUO (on request)
Deliverables

Costs

For Diagnostic testing

When requested through your General Practitioner / Clinical Geneticist / Pathologist / Hematologist, costs will be covered through your health insurance. The costs involved will be those for your consultation and/or 'remgeld'.

​

For Research testing

Below, you can find indicative prices (excl. VAT) for all potential options you'd require to accomplish your project. If you are interested, please contact us to receive a tailored quotation.

Update pending

Our prices are being updated. More info soon.

Euro Bill
Costs
Documents
Books

Documents & certificates

BELAC logo - UZ Brussel - Certificate Only.png
141-MED (UZ Brussel)
Plan experiment

Plan experiment

  1. For Diagnostics

This test is mainly performed as a diagnostic assay. In this case, please contact your General Practitioner or Clinical Geneticist (Centre for Medical Genetics of choice) to get the diagnosis started.


  1. For Research

This test can also be applied in context of research. For this, please get approval from your local ethical committee and/or make proper arrangements with your Biobank.

Please follow the steps below to start up an experiment with us.

Get in touch (ONLY FOR NEW PROJECTS)

Explain your project, so we can assist you to find the best solution.

Expect questions like :

  1. What type of sample would you like to analyze?

  2. Which elution buffer did you use?

  3. What are the expected concentrations of your samples?

  4. How many samples would you like to process?

  5. How fast do you need the results (TAT) and/or do we need to expedite?

  6. If you deviate from our sample types, are there test samples available?

  7. Are our standard deliverables ok?

  8. ...

Call Center Headset

1

Request quotation

Once you know which experiment you want to set up, fill out the 'Quote request' form, with the essential details of your project :

  1. Coordinates of the person to whom to address the quotation

  2. Which type of test you'd like to set up

  3. Do you require a specific deliverable?

  4. Do we need to expedite (comes at extra cost)?

  5. ...

Call Center Headset

2

Submit your samples

Once you agree with our terms (quote / TAT / terms & conditions)  :

  1. Fill out our sample submission form

  2. Send it via email : contact us

  3. Print out the form and include it with your samples

  4. Send your samples to us

  5. Label your tubes/plates correctly : see details here

  6. Adhere to the corresponding transport conditions listed under Sample types

  7. Indicate if we can discard your samples after completion of project

Call Center Headset

3

Your experiment starts

Now it is up to us... We will start your experiment as soon as possible.

  1. When expedited, the turn-around-time (TAT) is 1 month

  2. For standard requests the turn-around-time (TAT) is 2 months


The standard TAT is generally overestimated, but this extended timeframe allows us to : combine similar requests of multiple scientists and to repeat the experiment in case of issues.


Please refrain from contacting us in case the pre-agreed TAT didn't expire yet.

Call Center Headset

4

Genelist
White Rocks

Genelist

ABCC9
ACAD9
ACADVL
ACE
ACTA1
ACTC1
ACTN2
ADD3
ADRB2
AGT
AGTR1
AKAP9
ALPK3
ANKRD1
APOA1
B2M
BAG3
BRAF
CACNA1C
CACNB2
CALM1
CALM2
CALM3
CALR3
CASQ2
CASZ1
CAV3
CAVIN4
CBL
CDH2
CHRM2
CMYA5
CNBP
COA5
COA6
COX10
COX15
CRYAB
CSRP3
CTF1
CTNNA3
DES
DLG1
DMD
DNAJC19
DNM1L
DOLK
DSC2
DSG2
DSP
DTNA
ECRG4
ELAC2
ELN
EMD
EYA4
FBXO32
FHL1
FHL2
FHOD3
FKRP
FKTN
FLNC
FLT1
FOXD4
FXN
GAA
GATA4
GATA5
GATA6
GATAD1
GLA
GTPBP3
HACD1
HADHB
HAND1
HCN4
HIF1A
HRAS
HSPB6
HSPB7
ILK
INS-IGF2
ISL1
JPH2
JUP
KARS
KAT2B
KCND2
KCNE1
KCNH2
KCNJ12
KCNQ1
KIF20A
KLF10
LAMA2
LAMA4
LAMP2
LDB3
LMNA
LRRC10
MAP2K1
MAP2K2
MIB1
MIB2
MRPL3
MRPL44
MTO1
MYBPC3
MYH15
MYH6
MYH7
MYH7B
MYL2
MYL3
MYLK2
MYO6
MYOM1
MYOM3
MYOZ1
MYOZ2
MYPN
NAA10
NCOA6
NDUFAF1
NDUFV2
NEB
NEBL
NEXN
NKX2-5
NPPA
NRAP
OBSCN
OBSL1
OPA1
PDLIM3
PKP2
PLEC
PLEKHM2
PLN
PPCS
PRDM16
PRKAG2
PRNP
PSEN1
PSEN2
PTEN
PTPN11
RAF1
RANGRF
RBM20
RIT1
RPSA
RRAGC
RTKN2
RYR2
S100A1
SCN4B
SCN5A
SDHA
SGCB
SGCD
SGCG
SGK1
SHOC2
SLC12A1
SLC22A5
SLC25A3
SLC25A4
SMC1A
SNTA1
SOD2
SOS1
SYNE1
SYNE2
SYNM
TAF1A
TAX1BP3
TAZ
TBX20
TBX5
TCAP
TCF21
TGFB3
TJP1
TK2
TMED4
TMEM43
TMEM87B
TMPO
TNNC1
TNNI3
TNNI3K
TNNT2
TNNT3
TPM1
TRIM54
TRIM55
TRIM63
TRPM4
TSFM
TTN
TTR
TXNRD2
VCL
VEGFA
YWHAE
ZBTB17

bottom of page