Sars-Cov2 sequencing

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Sample types

Sars-Cov2 RNA (naso/oropharyngeal) > RNA

Microtube* or 96 wel plate (plate is preferred)

Log(copies/ml) > 3 (min. 10 µl)

Ice (max. 20 min) or dry ice

Sars-Cov2 on UTM (naso/oropharyngeal) > RNA

UTM (Universal Transport Medium) or PBS tube w/o inactivation buffer

500 µl (Ct<=25)

Room temperature

Extra requirements

Sample types

Deliverables

Below, you can find the type of data files that can be retrieved for this test.

If you require more information or need a more custom output, please consult our Bioinformatics page.

Bioinformatics

Annotated variant file

Text file containing all detected variants + relevant annotation (cross reference to various databases)

Diagnostic / RUO

Raw data - fast5 file

Raw data file generated by Oxford NanoPore sequencers

RUO (on request)

Sars-Cov2 SNV stats

PNG file to visualize the quality of the individual SNVs on the report

Diagnostic / RUO

Sars-Cov2 consensus fasta

Consensus Sars-Cov2 genome (fasta format) for all samples in run/centre

Diagnostic / RUO

Sars-Cov2 coverage stats

PNG file to visualize the completeness of Sars-Cov2 genome coverage

Diagnostic / RUO

Deliverables

Costs

Below, you can find indicative prices (excl. VAT) for all potential options you'd require to accomplish your project. If you are interested, please contact us to receive a tailored quotation.

Request quote

Costs

Documents & certificates

Sciensano recognized

Documents

Plan Experiment